How to Get Rid of Tree Fungus

Updated February 21, 2017

Certain fungi can ravage your trees, eating away at the wood, rotting the roots and defoliating the canopy. To treat your tree for a fungal disease, you must first diagnose what exactly is infecting the tree. Tree fungal diseases include root and butt rot, cankers, vascular or verticillium wilt, leafspots, sooty mould and powdery mildew. Depending on the specific fungus that's infecting your tree, your treatment options may include application of a fungicide, selective pruning of the tree or a combination of both.

Look for a white, powdery substance covering the leaf surfaces to diagnose powdery mildew. Powdery mildew is a fungal disease affecting nearly all trees that can survive through the winter.

Diagnose verticillium or vascular wilt by inspecting the tree for lighter colouring in the leaves and defoliation of the tree either on one side of the tree or all over. If you peel back the bark on the tree, you'll see discoloured streaks on the wood.

Identify root and butt rot diseases by looking for an overall loss of vigour and decay of the tree trunk. If you expose part of the tree's roots, you'll see that the roots are decayed.

Look for a black substance covering the surfaces of the tree's leaves to diagnose sooty mould. Instead of living off of the tree, this fungus actually grows on honeydew excreted by certain insects like aphids, so look for an insect infestation in the tree as well.

Diagnose a canker disease by looking for callused tissues developing on the outside of the tree's trunk or branches. Cankers usually emerge on wounded areas of the tree and can appear as discoloured swellings or sunken depressions that sometimes ooze a sap-like liquid.

Identify foliar diseases or "leafspots" by studying the tree's leaves to detect spots or blotches and defoliation of the leaves or needles. Leafspot fungi thrive on trees that are in the shade or crowded together and multiply noticeably in late summer.

Treat powdery mildew by spraying the tree with a sulphur-based fungicide in early autumn or spring at a rate of 1 to 2 tbsp per 1 gallon of water. Follow the directions on the fungicide's label.

Prune away the infected tree branches to treat verticillium or vascular wilt. This is a soil-borne fungus that is nearly impossible to get rid of, but you can help your tree to recover with proper pruning, good fertilisation and appropriate watering.

Treat Phytophthora root and butt rot by applying a fungicide to the soil around the tree and spraying the tree with a phosphonate spray in the spring or autumn. Most other kinds of root and butt rot are incurable, requiring removal of the infected trees and replanting with resistant tree species.

Get rid of the honeydew-secreting insects to kill sooty mould. Spray the leaves with water to remove the honeydew and the insects. Treat more severe infestations or larger trees with the appropriate insecticide, following the application and dosage instructions on the label.

Cut away the dead, dying and cankered branches during the winter or in early spring to treat canker diseases. Cut out the canker growths from larger branches or the trunk until only healthy wood remains, leaving clean edges. Treat the tree with the appropriate fungicide, applying the chemical according to the label.

Treat foliar diseases or "leafspots" by thinning out the branches in the fall and fertilising with a complete tree fertiliser in the spring. Discard or burn all fallen leaves and pruned branches to prevent the spread of the fungal disease. Consult with your local agricultural extension service if you have a widespread or severe fungal infection in your trees.


Always disinfect your pruning tools before and after using them on each tree to prevent spreading diseases. Disinfect the tools with a solution of one part water and three parts denatured alcohol. Wear protective gloves and a respiratory face mask when handling and spraying chemicals like insecticides and fungicides. Always follow the instructions on the label exactly.


Avoid using a sulphur-based fungicide on walnut trees or young trees, because the sulphur can injure these trees.

Things You'll Need

  • Fungicides
  • Pruning tools
  • Phosphonate spray
  • Insecticide
  • Denatured alcohol
  • Protective gloves
  • Respiratory face mask
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